VPAC – Drug Docking and Modeling Ligands Interactions Based on NAMD

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Qlogic Corporation uploaded interesting lecture “VPAC – Drug Docking and Modeling Ligands Interactions Based on NAMD using Tesla GPU’s”

Presenter: Michael Kuiper, PhD, Computational Scientist, Victorian Partnership for Advanced Computing

Using NVIDIA Tesla GPU technology, researchers can routinely simulate protein molecules in the order of hundreds of nanoseconds. At this timescale, it is possible to investigate detailed interactions of ligands with receptors starting with free ligand in a solution. NAMD users can decrease the time it takes to get started with the Molecular Dynamics SimCluster, designed with Tesla GPUs and interconnected with QLogic TrueScale InfiniBand.

[via Qlogic]

Tags: docking, GPU, Molecular Dynamics, molecular modeling

Category: Life Science, Software, Video